../../tmp/servers/virsirnadb/1814988962
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1728 | 1 | gacattattcagactctgt | 19 | |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 340 | ................... | 358 | 100 |
| NC_002232.1 | Rabbit oral papillomavirus, complete genome | 6647 | .c.........t..c..._ | 6630 | 78 |
| NC_002232.1 | Rabbit oral papillomavirus, complete genome | 4311 | .........a.t.______ | 4323 | 57 |
| NC_001524.1 | European elk papillomavirus, complete genome | 6996 | .c.........tg.c.... | 6978 | 78 |
| NC_015268.1 | Camelus dromedarius papillomavirus type 2, complete genome | 6577 | .c.........t..ct... | 6559 | 78 |
| NC_001691.1 | Human papillomavirus type 50, complete genome | 5152 | _.g..........t.a.._ | 5168 | 73 |
| NC_001691.1 | Human papillomavirus type 50, complete genome | 4972 | ____.a.a.g......... | 4958 | 63 |
| NC_012485.1 | Human papillomavirus type 109, complete genome | 6366 | __.........tg.c.... | 6350 | 73 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 6798 | __.........tg.c.... | 6782 | 73 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 5256 | _____...........___ | 5246 | 57 |
| NC_001690.1 | Human papillomavirus type 48, complete genome | 5915 | ____....gg......... | 5929 | 68 |
| NC_001693.1 | Human papillomavirus type 60, complete genome | 5283 | ..a.........c..____ | 5297 | 68 |
| NC_001458.1 | Human papillomavirus type 63, complete genome | 663 | _____...........___ | 653 | 57 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 4685 | ____.a..a........._ | 4698 | 63 |
| NC_001531.1 | Human papillomavirus - 5, complete genome | 1076 | ______..a........._ | 1087 | 57 |
| NC_001595.1 | Human papillomavirus type 7, complete genome | 4774 | ___.........t..____ | 4785 | 57 |
| NC_007612.1 | Bovine papillomavirus 7, complete genome | 5129 | _______..........a. | 5118 | 57 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 559 | ______..........c._ | 548 | 57 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 4455 | .........._________ | 4464 | 52 |
| NC_014143.1 | Bettongia penicillata papillomavirus 1, complete genome | 3983 | .........._________ | 3992 | 52 |
| NC_001694.1 | Human papillomavirus - 61, complete genome | 2626 | __.........._______ | 2617 | 52 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 3856 | .........._________ | 3847 | 52 |
| NC_006563.1 | Trichechus manatus latirostris papillomavirus 1, complete genome | 3113 | _________.......... | 3122 | 52 |
| NC_014185.1 | Human papillomavirus 121, complete genome | 3375 | .........._________ | 3384 | 52 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 3577 | .t.c..cg.........__ | 3561 | 68 |
| NC_014956.1 | Human papillomavirus type 134, complete genome | 1302 | .........a.a.t.____ | 1316 | 63 |
| NC_007150.1 | Procyon lotor papillomavirus 1, complete genome | 1252 | .g.........a.______ | 1264 | 57 |